Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 MIR648-201ENST00000385046 94 ntBASIC14□□□□□ -0.17
USB1Q9BQ65 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14□□□□□ -0.17
USB1Q9BQ65 RWDD4P1-201ENST00000488019 565 ntBASIC14□□□□□ -0.17
USB1Q9BQ65 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14□□□□□ -0.17
USB1Q9BQ65 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14□□□□□ -0.17
USB1Q9BQ65 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC14□□□□□ -0.17
USB1Q9BQ65 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14□□□□□ -0.17
USB1Q9BQ65 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14□□□□□ -0.17
USB1Q9BQ65 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 CR383656.12-201ENST00000549567 513 ntBASIC14□□□□□ -0.17
USB1Q9BQ65 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14□□□□□ -0.17
USB1Q9BQ65 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14□□□□□ -0.17
USB1Q9BQ65 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 SPDYE22P-201ENST00000582158 798 ntBASIC14□□□□□ -0.17
USB1Q9BQ65 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14□□□□□ -0.17
USB1Q9BQ65 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 AC008738.7-201ENST00000609744 511 ntBASIC14□□□□□ -0.17
USB1Q9BQ65 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14□□□□□ -0.17
USB1Q9BQ65 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 AC063926.2-201ENST00000623766 1308 ntBASIC13.99□□□□□ -0.17
USB1Q9BQ65 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 DOC2GP-202ENST00000514950 1163 ntBASIC13.99□□□□□ -0.17
USB1Q9BQ65 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 AC092337.1-201ENST00000568699 1129 ntBASIC13.99□□□□□ -0.17
USB1Q9BQ65 AC122134.1-202ENST00000569111 1201 ntBASIC13.99□□□□□ -0.17
USB1Q9BQ65 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 AC099568.2-201ENST00000609194 695 ntBASIC13.99□□□□□ -0.17
USB1Q9BQ65 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USB1Q9BQ65 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
USB1Q9BQ65 REXO1L8P-201ENST00000604378 1897 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms