Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 FRMD8P1-201ENST00000440433 1524 ntBASIC15.7■□□□□ 0.1
PHOX2BQ99453 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.7■□□□□ 0.1
PHOX2BQ99453 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.7■□□□□ 0.1
PHOX2BQ99453 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 AC025271.4-201ENST00000621477 1726 ntBASIC15.69■□□□□ 0.1
PHOX2BQ99453 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 AC087045.2-201ENST00000606279 1003 ntBASIC15.69■□□□□ 0.1
PHOX2BQ99453 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 AL136379.1-201ENST00000623471 2642 ntBASIC15.69■□□□□ 0.1
PHOX2BQ99453 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 REXO1L8P-201ENST00000604378 1897 ntBASIC15.69■□□□□ 0.1
PHOX2BQ99453 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PHOX2BQ99453 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHOX2BQ99453 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 AC026691.1-201ENST00000602502 2017 ntBASIC15.68■□□□□ 0.1
PHOX2BQ99453 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHOX2BQ99453 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PHOX2BQ99453 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms