Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 AL627231.1-201ENST00000394467 1125 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 AL133267.1-201ENST00000398220 340 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 ISCA2P1-201ENST00000425548 448 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 AC012158.2-201ENST00000536546 354 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 MIR3908-201ENST00000579798 126 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 AC092068.3-201ENST00000587894 2016 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 TBC1D3J-201ENST00000620719 1426 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 AC005622.1-201ENST00000636801 1703 ntBASIC16.66■□□□□ 0.26
LRCH3Q96II8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
LRCH3Q96II8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRCH3Q96II8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AL662844.4-201ENST00000606367 2838 ntBASIC16.65■□□□□ 0.26
LRCH3Q96II8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 PCDHB17P-201ENST00000539533 2393 ntBASIC16.65■□□□□ 0.26
LRCH3Q96II8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 FAM8A4P-201ENST00000435433 1213 ntBASIC16.65■□□□□ 0.26
LRCH3Q96II8 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AC103810.10-201ENST00000606504 343 ntBASIC16.65■□□□□ 0.26
LRCH3Q96II8 AL023803.2-201ENST00000620080 638 ntBASIC16.65■□□□□ 0.26
LRCH3Q96II8 AC051619.9-201ENST00000623237 597 ntBASIC16.65■□□□□ 0.26
LRCH3Q96II8 AL132780.4-201ENST00000624870 1135 ntBASIC16.65■□□□□ 0.26
LRCH3Q96II8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRCH3Q96II8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LRCH3Q96II8 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LRCH3Q96II8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRCH3Q96II8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRCH3Q96II8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRCH3Q96II8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
LRCH3Q96II8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms