Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PDLIM5Q96HC4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 DRD5P1-201ENST00000456605 1438 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 RN7SL399P-201ENST00000471648 279 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC026410.3-201ENST00000514280 936 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC036164.1-201ENST00000570544 333 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC005498.2-205ENST00000593218 784 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 AC106028.4-201ENST00000614509 607 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM5Q96HC4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
PDLIM5Q96HC4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 PMS2P2-201ENST00000425039 1128 ntBASIC15.08■□□□□ 0
PDLIM5Q96HC4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 FAM86LP-201ENST00000478302 853 ntBASIC15.08■□□□□ 0
PDLIM5Q96HC4 DOC2GP-202ENST00000514950 1163 ntBASIC15.08■□□□□ 0
PDLIM5Q96HC4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 AC104794.3-201ENST00000566840 1248 ntBASIC15.08■□□□□ 0
PDLIM5Q96HC4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 AL390755.1-201ENST00000623716 2027 ntBASIC15.08■□□□□ 0
PDLIM5Q96HC4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 AL360270.3-201ENST00000609118 1348 ntBASIC15.08■□□□□ 0
PDLIM5Q96HC4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms