Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 FGD5P1-202ENST00000614866 2498 ntBASIC17.46■□□□□ 0.39
TNFRSF25Q93038 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF25Q93038 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TNFRSF25Q93038 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TNFRSF25Q93038 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.46■□□□□ 0.38
TNFRSF25Q93038 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TNFRSF25Q93038 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.46■□□□□ 0.38
TNFRSF25Q93038 LINC01101-201ENST00000622953 1884 ntBASIC17.46■□□□□ 0.38
TNFRSF25Q93038 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TNFRSF25Q93038 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 ENPP7P5-201ENST00000541031 1031 ntBASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 DUX4L47-201ENST00000566374 394 ntBASIC17.45■□□□□ 0.38
TNFRSF25Q93038 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 MIR3197-201ENST00000582241 73 ntBASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AC025048.6-201ENST00000634326 1161 ntBASIC17.45■□□□□ 0.38
TNFRSF25Q93038 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 KRT8P14-201ENST00000414254 1442 ntBASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AC023824.1-201ENST00000562945 2975 ntBASIC17.45■□□□□ 0.38
TNFRSF25Q93038 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF25Q93038 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 AC011270.2-201ENST00000624293 2550 ntBASIC17.44■□□□□ 0.38
TNFRSF25Q93038 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 NUS1P3-201ENST00000423502 862 ntBASIC17.44■□□□□ 0.38
TNFRSF25Q93038 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF25Q93038 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms