Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC021723.1-201ENST00000486306 515 ntBASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC004466.1-201ENST00000599515 1080 ntBASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AP001505.2-201ENST00000616815 443 ntBASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 AC091812.3-201ENST00000621362 345 ntBASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 CU633904.3-201ENST00000624042 1029 ntBASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPGEF4Q8WZA2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 KRT8P19-201ENST00000551916 1455 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 MESTP3-201ENST00000503460 968 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AC005740.2-201ENST00000511085 419 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AC245884.6-201ENST00000515672 1067 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 DUX4L47-201ENST00000566374 394 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AC097724.1-201ENST00000609581 426 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 AL023803.2-201ENST00000620080 638 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 KRT8P29-201ENST00000420409 1371 ntBASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPGEF4Q8WZA2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 REXO1L5P-201ENST00000622260 2098 ntBASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 TNRC18P3-201ENST00000441896 2691 ntBASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 AC104457.1-201ENST00000401024 814 ntBASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 AL008707.1-201ENST00000422498 534 ntBASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 IMP3P2-201ENST00000489760 475 ntBASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms