Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AC004835.2-201ENST00000603762 682 ntBASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 BNIP3P1-202ENST00000550043 1585 ntBASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 AL627223.1-201ENST00000416693 442 ntBASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 AL691432.1-201ENST00000596308 1422 ntBASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
RTN4IP1Q8WWV3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.1□□□□□ -0.31
RTN4IP1Q8WWV3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms