Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AC211486.1-202ENST00000416371 468 ntBASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 UPF3AP3-201ENST00000420996 769 ntBASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AC211476.1-201ENST00000503899 468 ntBASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 KRT8P12-202ENST00000472924 1397 ntBASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLHC1Q8NHS4 AC023908.3-201ENST00000564211 3047 ntBASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 FO393414.2-201ENST00000405153 598 ntBASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 AC074338.1-201ENST00000416825 156 ntBASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 AC092865.5-201ENST00000545435 363 ntBASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 AL079307.3-201ENST00000556114 283 ntBASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 AL589739.1-201ENST00000607720 493 ntBASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.92□□□□□ -0.02
CLHC1Q8NHS4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 AL035456.1-201ENST00000456064 1369 ntBASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLHC1Q8NHS4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms