Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 FAM197Y3-203ENST00000618346 717 ntBASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 LINC01230-201ENST00000625222 3017 ntBASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 CICP4-201ENST00000447359 2812 ntBASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.99□□□□□ -0.17
BBS1Q8NFJ9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 HIST3H2BA-201ENST00000436555 524 ntBASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 AC120114.3-201ENST00000611923 658 ntBASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 OR2I1P-210ENST00000642037 4691 ntBASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 MTHFR-210ENST00000641407 2387 ntBASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 MYO15B-237ENST00000642007 4893 ntBASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
BBS1Q8NFJ9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 AL592309.1-201ENST00000443127 649 ntBASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.97□□□□□ -0.17
BBS1Q8NFJ9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms