Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
VPS37AQ8NEZ2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS37AQ8NEZ2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 AC004461.1-201ENST00000412461 403 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 SPDYE7P-202ENST00000420373 878 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 MTND6P24-201ENST00000440466 518 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 YBX1P5-201ENST00000509441 847 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 MIR4469-201ENST00000583919 79 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 MIR6069-201ENST00000620069 79 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 AC104581.4-201ENST00000623126 3052 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 ZBED1P1-201ENST00000502364 1930 ntBASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS37AQ8NEZ2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms