Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 AC190387.1-201ENST00000551683 408 ntBASIC15.08■□□□□ 0
RAB42Q8N4Z0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 AL049840.4-201ENST00000602422 811 ntBASIC15.08■□□□□ 0
RAB42Q8N4Z0 AC025181.2-201ENST00000606994 802 ntBASIC15.08■□□□□ 0
RAB42Q8N4Z0 AL391069.4-201ENST00000609583 481 ntBASIC15.08■□□□□ 0
RAB42Q8N4Z0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 AC007431.3-201ENST00000623221 587 ntBASIC15.08■□□□□ 0
RAB42Q8N4Z0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.08■□□□□ 0
RAB42Q8N4Z0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB42Q8N4Z0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 AL442647.2-201ENST00000429864 857 ntBASIC15.07■□□□□ 0
RAB42Q8N4Z0 MYCLP2-201ENST00000449268 967 ntBASIC15.07■□□□□ 0
RAB42Q8N4Z0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 AC138761.1-201ENST00000584393 385 ntBASIC15.07■□□□□ 0
RAB42Q8N4Z0 AC004790.1-201ENST00000612686 536 ntBASIC15.07■□□□□ 0
RAB42Q8N4Z0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.07■□□□□ 0
RAB42Q8N4Z0 AL645728.2-202ENST00000641679 227 ntBASIC15.07■□□□□ 0
RAB42Q8N4Z0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.07■□□□□ 0
RAB42Q8N4Z0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB42Q8N4Z0 SSR4P1-203ENST00000599569 2260 ntBASIC15.06■□□□□ 0
RAB42Q8N4Z0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 MIR661-201ENST00000384842 89 ntBASIC15.06■□□□□ 0
RAB42Q8N4Z0 AC134915.1-201ENST00000426461 574 ntBASIC15.06■□□□□ 0
RAB42Q8N4Z0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 AL358472.5-202ENST00000641448 1267 ntBASIC15.06■□□□□ 0
RAB42Q8N4Z0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.06■□□□□ 0
RAB42Q8N4Z0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB42Q8N4Z0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms