Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 AC011840.2-201ENST00000563063 1520 ntBASIC23.82■■□□□ 1.4
VPS8Q8N3P4 TPM3P8-201ENST00000330554 643 ntBASIC23.82■■□□□ 1.4
VPS8Q8N3P4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS8Q8N3P4 AL138725.1-201ENST00000407347 1314 ntBASIC23.81■■□□□ 1.4
VPS8Q8N3P4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 FAM8A4P-201ENST00000435433 1213 ntBASIC23.81■■□□□ 1.4
VPS8Q8N3P4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS8Q8N3P4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 MIR1908-201ENST00000410394 80 ntBASIC23.8■■□□□ 1.4
VPS8Q8N3P4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 FTLP10-202ENST00000505798 471 ntBASIC23.8■■□□□ 1.4
VPS8Q8N3P4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 REXO1L6P-201ENST00000603433 1515 ntBASIC23.8■■□□□ 1.4
VPS8Q8N3P4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS8Q8N3P4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 EEF1DP1-201ENST00000585891 896 ntBASIC23.79■■□□□ 1.4
VPS8Q8N3P4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
VPS8Q8N3P4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms