Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 AC013726.1-201ENST00000563747 2285 ntBASIC14.35□□□□□ -0.11
VRK2Q86Y07 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 AC074044.1-201ENST00000609673 707 ntBASIC14.35□□□□□ -0.11
VRK2Q86Y07 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 AC093028.1-201ENST00000622998 982 ntBASIC14.35□□□□□ -0.11
VRK2Q86Y07 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VRK2Q86Y07 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK2Q86Y07 WASH3P-207ENST00000560956 1394 ntBASIC14.34□□□□□ -0.11
VRK2Q86Y07 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 AL133267.1-201ENST00000398220 340 ntBASIC14.34□□□□□ -0.11
VRK2Q86Y07 AC107890.1-201ENST00000422478 521 ntBASIC14.34□□□□□ -0.11
VRK2Q86Y07 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VRK2Q86Y07 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK2Q86Y07 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VRK2Q86Y07 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VRK2Q86Y07 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
VRK2Q86Y07 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.33□□□□□ -0.11
VRK2Q86Y07 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VRK2Q86Y07 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VRK2Q86Y07 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VRK2Q86Y07 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VRK2Q86Y07 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.33□□□□□ -0.12
VRK2Q86Y07 FGD5P1-202ENST00000614866 2498 ntBASIC14.33□□□□□ -0.12
VRK2Q86Y07 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.33□□□□□ -0.12
VRK2Q86Y07 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VRK2Q86Y07 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VRK2Q86Y07 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
VRK2Q86Y07 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VRK2Q86Y07 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms