Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 AC008735.3-201ENST00000596646 500 ntBASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 TMBIM7P-203ENST00000641617 1718 ntBASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 TMEM14DP-201ENST00000422205 345 ntBASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM4Q86VH4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 ACKR1-201ENST00000368121 1240 ntBASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 NUS1P3-201ENST00000423502 862 ntBASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 AC093433.1-201ENST00000458048 571 ntBASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 AC068587.3-201ENST00000526613 355 ntBASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 SAMD11P1-201ENST00000571429 661 ntBASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms