Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 FAM58BP-201ENST00000439056 645 ntBASIC15.57■□□□□ 0.08
DENND4AQ7Z401 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 AC135983.4-201ENST00000564116 1262 ntBASIC15.57■□□□□ 0.08
DENND4AQ7Z401 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.57■□□□□ 0.08
DENND4AQ7Z401 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
DENND4AQ7Z401 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 AC078991.1-201ENST00000437297 610 ntBASIC15.55■□□□□ 0.08
DENND4AQ7Z401 RPL18P13-201ENST00000478088 569 ntBASIC15.55■□□□□ 0.08
DENND4AQ7Z401 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 AC007881.3-201ENST00000608897 607 ntBASIC15.55■□□□□ 0.08
DENND4AQ7Z401 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.55■□□□□ 0.08
DENND4AQ7Z401 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 NAP1L6-202ENST00000641404 1222 ntBASIC15.55■□□□□ 0.08
DENND4AQ7Z401 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.55■□□□□ 0.08
DENND4AQ7Z401 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DENND4AQ7Z401 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
DENND4AQ7Z401 AC104073.2-201ENST00000453737 312 ntBASIC15.54■□□□□ 0.08
DENND4AQ7Z401 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.54■□□□□ 0.08
DENND4AQ7Z401 ALG3P1-201ENST00000508806 1114 ntBASIC15.54■□□□□ 0.08
DENND4AQ7Z401 DUX4L46-201ENST00000566845 751 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms