Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 U82695.1-201ENST00000635752 1889 ntBASIC13.63□□□□□ -0.23
C11orf88Q6PI97 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.63□□□□□ -0.23
C11orf88Q6PI97 ACTG1P14-201ENST00000446382 1122 ntBASIC13.63□□□□□ -0.23
C11orf88Q6PI97 HCG4B-203ENST00000450128 991 ntBASIC13.63□□□□□ -0.23
C11orf88Q6PI97 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 AC007064.4-201ENST00000637740 555 ntBASIC13.63□□□□□ -0.23
C11orf88Q6PI97 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 AL592424.1-201ENST00000563624 1536 ntBASIC13.63□□□□□ -0.23
C11orf88Q6PI97 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C11orf88Q6PI97 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 AC005912.2-201ENST00000619492 2400 ntBASIC13.62□□□□□ -0.23
C11orf88Q6PI97 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms