Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKAL1Q5VV42 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.89■□□□□ 0.3
CDKAL1Q5VV42 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKAL1Q5VV42 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKAL1Q5VV42 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 AL109936.8-201ENST00000641772 604 ntBASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKAL1Q5VV42 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 AC211486.1-202ENST00000416371 468 ntBASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 AC254562.1-201ENST00000417586 456 ntBASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 BX842568.4-201ENST00000421222 227 ntBASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 AC211476.1-201ENST00000503899 468 ntBASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 SAMD11P1-201ENST00000571429 661 ntBASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 HSPA7-201ENST00000445535 1927 ntBASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKAL1Q5VV42 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKAL1Q5VV42 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms