Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 AL645937.2-201ENST00000396808 931 ntBASIC14.76□□□□□ -0.05
RIF1Q5UIP0 EIF3FP3-201ENST00000434851 1086 ntBASIC14.76□□□□□ -0.05
RIF1Q5UIP0 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.76□□□□□ -0.05
RIF1Q5UIP0 FAM86B3P-203ENST00000523992 854 ntBASIC14.76□□□□□ -0.05
RIF1Q5UIP0 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 AC005041.3-201ENST00000606287 649 ntBASIC14.76□□□□□ -0.05
RIF1Q5UIP0 AC084781.1-201ENST00000613737 656 ntBASIC14.76□□□□□ -0.05
RIF1Q5UIP0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 SHC1P1-201ENST00000425230 1745 ntBASIC14.76□□□□□ -0.05
RIF1Q5UIP0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIF1Q5UIP0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 KRT17P5-201ENST00000332088 839 ntBASIC14.75□□□□□ -0.05
RIF1Q5UIP0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 KLF2P1-201ENST00000447438 1042 ntBASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AC093909.3-201ENST00000504783 336 ntBASIC14.75□□□□□ -0.05
RIF1Q5UIP0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 SIGLEC18P-201ENST00000602271 909 ntBASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AC012073.1-201ENST00000606114 1108 ntBASIC14.75□□□□□ -0.05
RIF1Q5UIP0 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 AC244394.1-201ENST00000435000 1665 ntBASIC14.75□□□□□ -0.05
RIF1Q5UIP0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIF1Q5UIP0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 RN7SKP175-201ENST00000408472 289 ntBASIC14.74□□□□□ -0.05
RIF1Q5UIP0 DPY19L2P5-201ENST00000456300 331 ntBASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AC083801.1-201ENST00000491689 358 ntBASIC14.74□□□□□ -0.05
RIF1Q5UIP0 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms