Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC011840.2-201ENST00000563063 1520 ntBASIC19.14■□□□□ 0.65
RC3H1Q5TC82 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AD000864.1-201ENST00000624076 2295 ntBASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 RPSAP31-201ENST00000416648 895 ntBASIC19.13■□□□□ 0.65
RC3H1Q5TC82 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 RN7SL736P-201ENST00000613111 269 ntBASIC19.13■□□□□ 0.65
RC3H1Q5TC82 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AL008718.2-201ENST00000609206 1313 ntBASIC19.13■□□□□ 0.65
RC3H1Q5TC82 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AC244394.1-201ENST00000435000 1665 ntBASIC19.13■□□□□ 0.65
RC3H1Q5TC82 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RC3H1Q5TC82 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 TBC1D3J-201ENST00000620719 1426 ntBASIC19.12■□□□□ 0.65
RC3H1Q5TC82 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 AL138725.1-201ENST00000407347 1314 ntBASIC19.12■□□□□ 0.65
RC3H1Q5TC82 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 AC239868.1-201ENST00000369385 493 ntBASIC19.12■□□□□ 0.65
RC3H1Q5TC82 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 POU5F1P2-201ENST00000521750 823 ntBASIC19.12■□□□□ 0.65
RC3H1Q5TC82 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.12■□□□□ 0.65
RC3H1Q5TC82 AC051619.9-201ENST00000623237 597 ntBASIC19.12■□□□□ 0.65
RC3H1Q5TC82 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 Z98259.2-201ENST00000641583 609 ntBASIC19.12■□□□□ 0.65
RC3H1Q5TC82 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RC3H1Q5TC82 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms