Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATPAF1Q5TC12 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AL139400.1-201ENST00000366220 510 ntBASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AC069262.1-201ENST00000539058 672 ntBASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AC025678.2-201ENST00000562061 970 ntBASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AC015911.4-201ENST00000588022 1070 ntBASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AC026979.3-201ENST00000607315 403 ntBASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 MROH4P-201ENST00000431302 1578 ntBASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATPAF1Q5TC12 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AL137784.3-201ENST00000623858 2288 ntBASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AC009090.5-201ENST00000624886 2285 ntBASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 KRT8P44-201ENST00000441609 1350 ntBASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AL353705.2-201ENST00000428243 662 ntBASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms