Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 AP000845.1-201ENST00000581677 2131 ntBASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 GHSR-202ENST00000427970 912 ntBASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 PDPK2P-202ENST00000562415 1191 ntBASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AZGP1P1-201ENST00000411909 902 ntBASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 KRT18P2-201ENST00000447938 1258 ntBASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AL135744.1-201ENST00000565098 629 ntBASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AL691432.3-201ENST00000621860 400 ntBASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AC097359.2-201ENST00000604992 2389 ntBASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 HSPA7-201ENST00000445535 1927 ntBASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 AC113367.3-201ENST00000508316 1912 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms