Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 AC024681.1-201ENST00000521917 487 ntBASIC18.87■□□□□ 0.61
CCDC93Q567U6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 RN7SL574P-201ENST00000581512 297 ntBASIC18.87■□□□□ 0.61
CCDC93Q567U6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 AP001002.3-201ENST00000623482 206 ntBASIC18.87■□□□□ 0.61
CCDC93Q567U6 AC092978.1-202ENST00000637590 1327 ntBASIC18.87■□□□□ 0.61
CCDC93Q567U6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 AC006449.6-201ENST00000612330 2296 ntBASIC18.86■□□□□ 0.61
CCDC93Q567U6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 AC132872.4-202ENST00000622924 2756 ntBASIC18.86■□□□□ 0.61
CCDC93Q567U6 AC008132.1-202ENST00000342005 1389 ntBASIC18.86■□□□□ 0.61
CCDC93Q567U6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 AL354877.1-201ENST00000424412 413 ntBASIC18.86■□□□□ 0.61
CCDC93Q567U6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 HIST2H2BB-201ENST00000449108 381 ntBASIC18.86■□□□□ 0.61
CCDC93Q567U6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 PRKXP1-201ENST00000561423 1122 ntBASIC18.86■□□□□ 0.61
CCDC93Q567U6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC93Q567U6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC93Q567U6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 KRT8P4-201ENST00000509735 1454 ntBASIC18.85■□□□□ 0.61
CCDC93Q567U6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 KRT8P14-201ENST00000414254 1442 ntBASIC18.85■□□□□ 0.61
CCDC93Q567U6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 AL513523.2-202ENST00000427283 2040 ntBASIC18.85■□□□□ 0.61
CCDC93Q567U6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 AL645937.2-201ENST00000396808 931 ntBASIC18.85■□□□□ 0.61
CCDC93Q567U6 AC011742.3-201ENST00000439053 820 ntBASIC18.85■□□□□ 0.61
CCDC93Q567U6 EEF1DP6-201ENST00000449232 372 ntBASIC18.85■□□□□ 0.61
CCDC93Q567U6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 AC100757.4-201ENST00000626934 759 ntBASIC18.85■□□□□ 0.61
CCDC93Q567U6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms