Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
BSXQ3C1V8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 MIR346-201ENST00000362234 95 ntBASIC12.58□□□□□ -0.4
BSXQ3C1V8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 ADH5P3-201ENST00000433842 1137 ntBASIC12.58□□□□□ -0.4
BSXQ3C1V8 KRT8P37-201ENST00000451609 1420 ntBASIC12.58□□□□□ -0.4
BSXQ3C1V8 RPL13AP23-201ENST00000480739 586 ntBASIC12.58□□□□□ -0.4
BSXQ3C1V8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 CYP4F24P-201ENST00000586049 1580 ntBASIC12.58□□□□□ -0.4
BSXQ3C1V8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 FGD5P1-202ENST00000614866 2498 ntBASIC12.58□□□□□ -0.4
BSXQ3C1V8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.58□□□□□ -0.4
BSXQ3C1V8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BSXQ3C1V8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 PHKG1P2-201ENST00000457537 863 ntBASIC12.57□□□□□ -0.4
BSXQ3C1V8 RN7SL589P-201ENST00000481268 310 ntBASIC12.57□□□□□ -0.4
BSXQ3C1V8 FAM86C2P-203ENST00000528684 1004 ntBASIC12.57□□□□□ -0.4
BSXQ3C1V8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.57□□□□□ -0.4
BSXQ3C1V8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 AC092865.6-201ENST00000642101 219 ntBASIC12.57□□□□□ -0.4
BSXQ3C1V8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.57□□□□□ -0.4
BSXQ3C1V8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BSXQ3C1V8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms