Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 AC138649.2-201ENST00000615886 705 ntBASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 KRT8P19-201ENST00000551916 1455 ntBASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 AC006449.5-201ENST00000610658 2098 ntBASIC16.71■□□□□ 0.27
TRIM71Q2Q1W2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM71Q2Q1W2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
TRIM71Q2Q1W2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM71Q2Q1W2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 TUBBP5-203ENST00000508529 1334 ntBASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC024909.3-201ENST00000611513 2257 ntBASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC055811.4-201ENST00000624039 1754 ntBASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AL136309.1-201ENST00000403917 691 ntBASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC079328.2-201ENST00000561241 3354 ntBASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms