Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD47Q08722 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.45□□□□□ -0.1
CD47Q08722 TFAMP1-201ENST00000412727 736 ntBASIC14.45□□□□□ -0.1
CD47Q08722 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.45□□□□□ -0.1
CD47Q08722 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.45□□□□□ -0.1
CD47Q08722 FAM86C2P-203ENST00000528684 1004 ntBASIC14.45□□□□□ -0.1
CD47Q08722 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.45□□□□□ -0.1
CD47Q08722 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.45□□□□□ -0.1
CD47Q08722 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.45□□□□□ -0.1
CD47Q08722 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.45□□□□□ -0.1
CD47Q08722 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CD47Q08722 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 AC097359.2-201ENST00000604992 2389 ntBASIC14.45□□□□□ -0.1
CD47Q08722 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.45□□□□□ -0.1
CD47Q08722 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 AC097376.2-205ENST00000610159 5334 ntBASIC14.45□□□□□ -0.1
CD47Q08722 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.45□□□□□ -0.1
CD47Q08722 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.44□□□□□ -0.1
CD47Q08722 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD47Q08722 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.44□□□□□ -0.1
CD47Q08722 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 MIR574-201ENST00000385209 96 ntBASIC14.44□□□□□ -0.1
CD47Q08722 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 YBX2P1-201ENST00000394192 760 ntBASIC14.44□□□□□ -0.1
CD47Q08722 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.44□□□□□ -0.1
CD47Q08722 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.44□□□□□ -0.1
CD47Q08722 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 RN7SL589P-201ENST00000481268 310 ntBASIC14.44□□□□□ -0.1
CD47Q08722 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.44□□□□□ -0.1
CD47Q08722 AC105233.2-201ENST00000523697 349 ntBASIC14.44□□□□□ -0.1
CD47Q08722 AF228730.5-201ENST00000530288 346 ntBASIC14.44□□□□□ -0.1
CD47Q08722 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.44□□□□□ -0.1
CD47Q08722 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CD47Q08722 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CD47Q08722 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.44□□□□□ -0.1
CD47Q08722 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CD47Q08722 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD47Q08722 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 ACE3P-201ENST00000423435 1973 ntBASIC14.43□□□□□ -0.1
CD47Q08722 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD47Q08722 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CD47Q08722 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms