Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 KRT18P28-201ENST00000453838 1332 ntBASIC14.96□□□□□ -0.01
HMGCS1Q01581 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AL512361.1-201ENST00000554200 418 ntBASIC14.96□□□□□ -0.01
HMGCS1Q01581 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 LINC01115-203ENST00000606068 577 ntBASIC14.96□□□□□ -0.01
HMGCS1Q01581 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AL138828.2-201ENST00000615812 383 ntBASIC14.96□□□□□ -0.01
HMGCS1Q01581 Z92544.3-201ENST00000624747 417 ntBASIC14.96□□□□□ -0.01
HMGCS1Q01581 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCS1Q01581 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCS1Q01581 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
HMGCS1Q01581 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
HMGCS1Q01581 FO538757.1-201ENST00000623083 1397 ntBASIC14.96□□□□□ -0.02
HMGCS1Q01581 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCS1Q01581 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCS1Q01581 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCS1Q01581 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HMGCS1Q01581 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCS1Q01581 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 HLA-V-204ENST00000476601 1289 ntBASIC14.95□□□□□ -0.02
HMGCS1Q01581 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 AC015910.1-201ENST00000579400 975 ntBASIC14.95□□□□□ -0.02
HMGCS1Q01581 TEX28P1-201ENST00000613479 1221 ntBASIC14.95□□□□□ -0.02
HMGCS1Q01581 TEX28P2-201ENST00000617764 1221 ntBASIC14.95□□□□□ -0.02
HMGCS1Q01581 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.95□□□□□ -0.02
HMGCS1Q01581 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 AL009178.2-201ENST00000597278 2719 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms