Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BCAR1P56945 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BCAR1P56945 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BCAR1P56945 KRT8P44-201ENST00000441609 1350 ntBASIC16.74■□□□□ 0.27
BCAR1P56945 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.74■□□□□ 0.27
BCAR1P56945 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BCAR1P56945 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BCAR1P56945 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BCAR1P56945 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BCAR1P56945 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BCAR1P56945 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.73■□□□□ 0.27
BCAR1P56945 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.73■□□□□ 0.27
BCAR1P56945 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.73■□□□□ 0.27
BCAR1P56945 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
BCAR1P56945 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.73■□□□□ 0.27
BCAR1P56945 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.73■□□□□ 0.27
BCAR1P56945 MIR4313-201ENST00000580760 101 ntBASIC16.73■□□□□ 0.27
BCAR1P56945 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BCAR1P56945 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.73■□□□□ 0.27
BCAR1P56945 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BCAR1P56945 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.73■□□□□ 0.27
BCAR1P56945 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.73■□□□□ 0.27
BCAR1P56945 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.73■□□□□ 0.27
BCAR1P56945 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BCAR1P56945 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCAR1P56945 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.72■□□□□ 0.27
BCAR1P56945 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.72■□□□□ 0.27
BCAR1P56945 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.72■□□□□ 0.27
BCAR1P56945 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BCAR1P56945 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.72■□□□□ 0.27
BCAR1P56945 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 AC009542.2-202ENST00000619004 1067 ntBASIC16.72■□□□□ 0.27
BCAR1P56945 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
BCAR1P56945 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.72■□□□□ 0.27
BCAR1P56945 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.72■□□□□ 0.27
BCAR1P56945 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.72■□□□□ 0.27
BCAR1P56945 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCAR1P56945 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.71■□□□□ 0.27
BCAR1P56945 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.71■□□□□ 0.27
BCAR1P56945 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BCAR1P56945 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 AL133338.1-201ENST00000565695 1517 ntBASIC16.71■□□□□ 0.27
BCAR1P56945 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
BCAR1P56945 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.71■□□□□ 0.27
BCAR1P56945 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.71■□□□□ 0.27
BCAR1P56945 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BCAR1P56945 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCAR1P56945 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms