Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKN2DP55273 AC055876.3-201ENST00000431496 288 ntBASIC15.29■□□□□ 0.04
CDKN2DP55273 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKN2DP55273 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKN2DP55273 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 TIMM17BP1-201ENST00000545713 516 ntBASIC15.29■□□□□ 0.04
CDKN2DP55273 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 AC011467.4-201ENST00000594891 528 ntBASIC15.29■□□□□ 0.04
CDKN2DP55273 AC000095.1-201ENST00000603208 874 ntBASIC15.29■□□□□ 0.04
CDKN2DP55273 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 AC008738.7-201ENST00000609744 511 ntBASIC15.29■□□□□ 0.04
CDKN2DP55273 AC138649.4-201ENST00000612222 287 ntBASIC15.29■□□□□ 0.04
CDKN2DP55273 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CDKN2DP55273 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.29■□□□□ 0.04
CDKN2DP55273 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKN2DP55273 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDKN2DP55273 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDKN2DP55273 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
CDKN2DP55273 AC104457.1-201ENST00000401024 814 ntBASIC15.28■□□□□ 0.04
CDKN2DP55273 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CDKN2DP55273 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKN2DP55273 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKN2DP55273 AL390955.2-201ENST00000603032 514 ntBASIC15.28■□□□□ 0.04
CDKN2DP55273 AC093512.1-201ENST00000617969 520 ntBASIC15.28■□□□□ 0.04
CDKN2DP55273 AL158212.4-201ENST00000624062 1286 ntBASIC15.28■□□□□ 0.04
CDKN2DP55273 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDKN2DP55273 AC004840.1-201ENST00000636359 365 ntBASIC15.28■□□□□ 0.04
CDKN2DP55273 AL645728.2-202ENST00000641679 227 ntBASIC15.28■□□□□ 0.04
CDKN2DP55273 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKN2DP55273 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDKN2DP55273 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDKN2DP55273 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKN2DP55273 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKN2DP55273 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKN2DP55273 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.27■□□□□ 0.04
CDKN2DP55273 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKN2DP55273 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKN2DP55273 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
CDKN2DP55273 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDKN2DP55273 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.27■□□□□ 0.04
CDKN2DP55273 FAM8A3P-201ENST00000427218 844 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms