Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MIR6069-201ENST00000620069 79 ntBASIC14.12□□□□□ -0.15
HMGA2P52926 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HMGA2P52926 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HMGA2P52926 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGA2P52926 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGA2P52926 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGA2P52926 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HMGA2P52926 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGA2P52926 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGA2P52926 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HMGA2P52926 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
HMGA2P52926 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 RPL13P2-201ENST00000440687 659 ntBASIC14.11□□□□□ -0.15
HMGA2P52926 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGA2P52926 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGA2P52926 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGA2P52926 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.11□□□□□ -0.15
HMGA2P52926 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGA2P52926 INTS4P1-203ENST00000641008 3683 ntBASIC14.11□□□□□ -0.15
HMGA2P52926 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGA2P52926 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HMGA2P52926 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGA2P52926 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 AC152010.1-201ENST00000415779 2006 ntBASIC14.1□□□□□ -0.15
HMGA2P52926 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGA2P52926 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 AL928921.2-201ENST00000641325 2442 ntBASIC14.1□□□□□ -0.15
HMGA2P52926 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HMGA2P52926 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGA2P52926 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGA2P52926 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.1□□□□□ -0.15
HMGA2P52926 GPS2P2-201ENST00000430745 888 ntBASIC14.1□□□□□ -0.15
HMGA2P52926 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 AC005237.2-201ENST00000434368 219 ntBASIC14.1□□□□□ -0.15
HMGA2P52926 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms