Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.52□□□□□ -0.41
RAB5CP51148 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB5CP51148 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
RAB5CP51148 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB5CP51148 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RAB5CP51148 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 ATP5G1P1-201ENST00000448724 379 ntBASIC12.51□□□□□ -0.41
RAB5CP51148 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB5CP51148 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB5CP51148 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 AC064862.7-201ENST00000604520 867 ntBASIC12.51□□□□□ -0.41
RAB5CP51148 HYMAI.1-201ENST00000620949 238 ntBASIC12.51□□□□□ -0.41
RAB5CP51148 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RAB5CP51148 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RAB5CP51148 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RAB5CP51148 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.51□□□□□ -0.41
RAB5CP51148 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5CP51148 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5CP51148 AL591122.2-201ENST00000624125 1853 ntBASIC12.51□□□□□ -0.41
RAB5CP51148 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 RCN1P2-201ENST00000398357 915 ntBASIC12.5□□□□□ -0.41
RAB5CP51148 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB5CP51148 AC096582.2-201ENST00000510860 516 ntBASIC12.5□□□□□ -0.41
RAB5CP51148 AC008550.1-201ENST00000511500 884 ntBASIC12.5□□□□□ -0.41
RAB5CP51148 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB5CP51148 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 AC012569.1-201ENST00000591191 1524 ntBASIC12.5□□□□□ -0.41
RAB5CP51148 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms