Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL138725.1-201ENST00000407347 1314 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.23■□□□□ 0.35
TM4SF4P48230 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.23■□□□□ 0.35
TM4SF4P48230 AC144522.1-201ENST00000625111 1658 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 LINC01165-201ENST00000445190 1623 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TM4SF4P48230 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.23■□□□□ 0.35
TM4SF4P48230 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.23■□□□□ 0.35
TM4SF4P48230 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.23■□□□□ 0.35
TM4SF4P48230 AL157407.1-201ENST00000435784 904 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.23■□□□□ 0.35
TM4SF4P48230 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.23■□□□□ 0.35
TM4SF4P48230 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.23■□□□□ 0.35
TM4SF4P48230 AC024293.1-201ENST00000467930 498 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 AC012158.2-201ENST00000536546 354 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.23■□□□□ 0.35
TM4SF4P48230 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TM4SF4P48230 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.23■□□□□ 0.35
TM4SF4P48230 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.23■□□□□ 0.35
TM4SF4P48230 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.23■□□□□ 0.35
TM4SF4P48230 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 AC138466.5-201ENST00000624002 808 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 AC069224.1-201ENST00000566372 1715 ntBASIC17.23■□□□□ 0.35
TM4SF4P48230 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TM4SF4P48230 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TM4SF4P48230 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM4SF4P48230 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TM4SF4P48230 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.22■□□□□ 0.35
TM4SF4P48230 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.22■□□□□ 0.35
TM4SF4P48230 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 MRPL22P1-201ENST00000505398 616 ntBASIC17.22■□□□□ 0.35
TM4SF4P48230 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.22■□□□□ 0.35
TM4SF4P48230 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.22■□□□□ 0.35
TM4SF4P48230 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 AP000911.2-201ENST00000534330 502 ntBASIC17.22■□□□□ 0.35
TM4SF4P48230 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.22■□□□□ 0.35
TM4SF4P48230 NUDT4P2-201ENST00000578341 546 ntBASIC17.22■□□□□ 0.35
TM4SF4P48230 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.22■□□□□ 0.35
TM4SF4P48230 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.22■□□□□ 0.35
TM4SF4P48230 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.22■□□□□ 0.35
TM4SF4P48230 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.22■□□□□ 0.35
TM4SF4P48230 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.22■□□□□ 0.35
TM4SF4P48230 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 AL157414.3-201ENST00000624276 1954 ntBASIC17.22■□□□□ 0.35
TM4SF4P48230 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.22■□□□□ 0.35
TM4SF4P48230 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM4SF4P48230 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TM4SF4P48230 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms