Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RFC5P40937 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFC5P40937 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RFC5P40937 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 AC087481.3-201ENST00000602886 1894 ntBASIC17.04■□□□□ 0.32
RFC5P40937 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC5P40937 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RFC5P40937 AC244107.1-201ENST00000442033 332 ntBASIC17.04■□□□□ 0.32
RFC5P40937 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.04■□□□□ 0.32
RFC5P40937 CROCCP4-201ENST00000457096 498 ntBASIC17.04■□□□□ 0.32
RFC5P40937 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFC5P40937 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.04■□□□□ 0.32
RFC5P40937 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC5P40937 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC5P40937 MIR6805-201ENST00000615055 62 ntBASIC17.04■□□□□ 0.32
RFC5P40937 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC5P40937 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC5P40937 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFC5P40937 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC5P40937 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFC5P40937 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFC5P40937 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC5P40937 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFC5P40937 MIR1909-201ENST00000411312 80 ntBASIC17.03■□□□□ 0.32
RFC5P40937 KLF2P2-201ENST00000416807 1039 ntBASIC17.03■□□□□ 0.32
RFC5P40937 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC5P40937 AC106760.1-201ENST00000508690 800 ntBASIC17.03■□□□□ 0.32
RFC5P40937 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC5P40937 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC5P40937 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC5P40937 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFC5P40937 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RFC5P40937 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFC5P40937 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC5P40937 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC5P40937 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
RFC5P40937 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
RFC5P40937 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RFC5P40937 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 KRT8P35-201ENST00000483942 1338 ntBASIC17.02■□□□□ 0.32
RFC5P40937 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFC5P40937 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFC5P40937 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RFC5P40937 RNU1-114P-201ENST00000365297 166 ntBASIC17.02■□□□□ 0.32
RFC5P40937 ACTBP8-201ENST00000403258 1108 ntBASIC17.02■□□□□ 0.32
RFC5P40937 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 GHSR-202ENST00000427970 912 ntBASIC17.02■□□□□ 0.32
RFC5P40937 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RFC5P40937 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC5P40937 AC022210.1-201ENST00000449856 793 ntBASIC17.02■□□□□ 0.32
RFC5P40937 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.02■□□□□ 0.32
RFC5P40937 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC5P40937 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RFC5P40937 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC5P40937 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC5P40937 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC5P40937 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC5P40937 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFC5P40937 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.02■□□□□ 0.31
RFC5P40937 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFC5P40937 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC5P40937 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC5P40937 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC5P40937 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC5P40937 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms