Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
COL15A1P39059 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.34■□□□□ 0.69
COL15A1P39059 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.34■□□□□ 0.69
COL15A1P39059 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.34■□□□□ 0.69
COL15A1P39059 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.34■□□□□ 0.69
COL15A1P39059 AC004466.1-201ENST00000599515 1080 ntBASIC19.34■□□□□ 0.69
COL15A1P39059 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 AC138466.3-201ENST00000619983 221 ntBASIC19.34■□□□□ 0.69
COL15A1P39059 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.34■□□□□ 0.69
COL15A1P39059 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.34■□□□□ 0.69
COL15A1P39059 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.34■□□□□ 0.69
COL15A1P39059 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.34■□□□□ 0.69
COL15A1P39059 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL15A1P39059 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.33■□□□□ 0.69
COL15A1P39059 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
COL15A1P39059 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL15A1P39059 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL15A1P39059 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.33■□□□□ 0.69
COL15A1P39059 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
COL15A1P39059 HLA-K-203ENST00000430151 1046 ntBASIC19.33■□□□□ 0.69
COL15A1P39059 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL15A1P39059 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COL15A1P39059 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.33■□□□□ 0.69
COL15A1P39059 FGFR3P5-201ENST00000564496 886 ntBASIC19.33■□□□□ 0.69
COL15A1P39059 RN7SL574P-201ENST00000581512 297 ntBASIC19.33■□□□□ 0.69
COL15A1P39059 MIR4706-201ENST00000582134 82 ntBASIC19.33■□□□□ 0.69
COL15A1P39059 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.33■□□□□ 0.69
COL15A1P39059 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.33■□□□□ 0.69
COL15A1P39059 AC091544.8-201ENST00000619490 361 ntBASIC19.33■□□□□ 0.69
COL15A1P39059 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.33■□□□□ 0.69
COL15A1P39059 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL15A1P39059 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL15A1P39059 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL15A1P39059 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
COL15A1P39059 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.33■□□□□ 0.68
COL15A1P39059 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.33■□□□□ 0.68
COL15A1P39059 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
COL15A1P39059 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
COL15A1P39059 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.33■□□□□ 0.68
COL15A1P39059 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL15A1P39059 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.32■□□□□ 0.68
COL15A1P39059 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 AC013355.1-201ENST00000562625 723 ntBASIC19.32■□□□□ 0.68
COL15A1P39059 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.32■□□□□ 0.68
COL15A1P39059 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
COL15A1P39059 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 TUBBP5-203ENST00000508529 1334 ntBASIC19.32■□□□□ 0.68
COL15A1P39059 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 AC090616.6-203ENST00000579186 1945 ntBASIC19.32■□□□□ 0.68
COL15A1P39059 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.32■□□□□ 0.68
COL15A1P39059 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.32■□□□□ 0.68
COL15A1P39059 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.32■□□□□ 0.68
COL15A1P39059 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.32■□□□□ 0.68
COL15A1P39059 ACTG1P2-201ENST00000415776 1125 ntBASIC19.32■□□□□ 0.68
COL15A1P39059 ACTG1P11-201ENST00000425411 1125 ntBASIC19.32■□□□□ 0.68
COL15A1P39059 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.32■□□□□ 0.68
COL15A1P39059 TMEM198B-204ENST00000484016 896 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms