Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.8□□□□□ -0.2
CD40LGP29965 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.8□□□□□ -0.2
CD40LGP29965 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CD40LGP29965 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CD40LGP29965 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 CES1P1-201ENST00000421606 1704 ntBASIC13.8□□□□□ -0.2
CD40LGP29965 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CD40LGP29965 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CD40LGP29965 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.8□□□□□ -0.2
CD40LGP29965 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.79□□□□□ -0.2
CD40LGP29965 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CD40LGP29965 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CD40LGP29965 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CD40LGP29965 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.79□□□□□ -0.2
CD40LGP29965 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.79□□□□□ -0.2
CD40LGP29965 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.79□□□□□ -0.2
CD40LGP29965 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
CD40LGP29965 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.79□□□□□ -0.2
CD40LGP29965 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.79□□□□□ -0.2
CD40LGP29965 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.79□□□□□ -0.2
CD40LGP29965 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.79□□□□□ -0.2
CD40LGP29965 MIR5100-201ENST00000579544 119 ntBASIC13.79□□□□□ -0.2
CD40LGP29965 AP005901.3-202ENST00000581653 237 ntBASIC13.79□□□□□ -0.2
CD40LGP29965 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.79□□□□□ -0.2
CD40LGP29965 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.79□□□□□ -0.2
CD40LGP29965 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.79□□□□□ -0.2
CD40LGP29965 AL691432.3-201ENST00000621860 400 ntBASIC13.79□□□□□ -0.2
CD40LGP29965 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.79□□□□□ -0.2
CD40LGP29965 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CD40LGP29965 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 AC019294.4-201ENST00000561777 2905 ntBASIC13.79□□□□□ -0.2
CD40LGP29965 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.79□□□□□ -0.2
CD40LGP29965 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CD40LGP29965 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms