Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 AC078875.1-201ENST00000431907 724 ntBASIC17.07■□□□□ 0.32
CTGFP29279 AC026320.2-201ENST00000434379 478 ntBASIC17.07■□□□□ 0.32
CTGFP29279 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 AC012441.2-201ENST00000444843 739 ntBASIC17.07■□□□□ 0.32
CTGFP29279 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.07■□□□□ 0.32
CTGFP29279 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.07■□□□□ 0.32
CTGFP29279 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CTGFP29279 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CTGFP29279 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 AL137783.1-201ENST00000623494 1896 ntBASIC17.06■□□□□ 0.32
CTGFP29279 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.06■□□□□ 0.32
CTGFP29279 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.06■□□□□ 0.32
CTGFP29279 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.06■□□□□ 0.32
CTGFP29279 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.06■□□□□ 0.32
CTGFP29279 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CTGFP29279 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.06■□□□□ 0.32
CTGFP29279 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CTGFP29279 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTGFP29279 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.05■□□□□ 0.32
CTGFP29279 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CTGFP29279 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.05■□□□□ 0.32
CTGFP29279 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 AC079112.1-201ENST00000454972 939 ntBASIC17.05■□□□□ 0.32
CTGFP29279 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.05■□□□□ 0.32
CTGFP29279 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.05■□□□□ 0.32
CTGFP29279 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTGFP29279 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.05■□□□□ 0.32
CTGFP29279 AL031713.1-201ENST00000564813 661 ntBASIC17.05■□□□□ 0.32
CTGFP29279 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.05■□□□□ 0.32
CTGFP29279 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.05■□□□□ 0.32
CTGFP29279 AC005632.3-201ENST00000605544 308 ntBASIC17.05■□□□□ 0.32
CTGFP29279 MIR6858-201ENST00000620733 67 ntBASIC17.05■□□□□ 0.32
CTGFP29279 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.05■□□□□ 0.32
CTGFP29279 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTGFP29279 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.05■□□□□ 0.32
CTGFP29279 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms