Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL929302.1-201ENST00000426556 871 ntBASIC19.72■□□□□ 0.75
RXRBP28702 NME6-208ENST00000435684 599 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRBP28702 RPL3P5-201ENST00000441645 1232 ntBASIC19.72■□□□□ 0.75
RXRBP28702 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRBP28702 AC053503.3-201ENST00000448375 114 ntBASIC19.72■□□□□ 0.75
RXRBP28702 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRBP28702 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRBP28702 AC068831.5-201ENST00000557387 328 ntBASIC19.72■□□□□ 0.75
RXRBP28702 RN7SL357P-201ENST00000581065 298 ntBASIC19.72■□□□□ 0.75
RXRBP28702 AC020910.5-201ENST00000623668 1865 ntBASIC19.72■□□□□ 0.75
RXRBP28702 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.72■□□□□ 0.75
RXRBP28702 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
RXRBP28702 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 AC134043.2-201ENST00000624206 2238 ntBASIC19.72■□□□□ 0.75
RXRBP28702 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRBP28702 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RXRBP28702 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.71■□□□□ 0.75
RXRBP28702 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RXRBP28702 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RXRBP28702 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RXRBP28702 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.71■□□□□ 0.75
RXRBP28702 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 AC226150.1-201ENST00000544259 466 ntBASIC19.71■□□□□ 0.75
RXRBP28702 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.71■□□□□ 0.75
RXRBP28702 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
RXRBP28702 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC19.71■□□□□ 0.75
RXRBP28702 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.71■□□□□ 0.75
RXRBP28702 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RXRBP28702 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RXRBP28702 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RXRBP28702 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
RXRBP28702 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RXRBP28702 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RXRBP28702 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC19.7■□□□□ 0.74
RXRBP28702 KRT18P46-201ENST00000435568 1279 ntBASIC19.7■□□□□ 0.74
RXRBP28702 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 AC068867.1-201ENST00000559855 150 ntBASIC19.7■□□□□ 0.74
RXRBP28702 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 AC007250.1-201ENST00000608934 338 ntBASIC19.7■□□□□ 0.74
RXRBP28702 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.7■□□□□ 0.74
RXRBP28702 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.7■□□□□ 0.74
RXRBP28702 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.7■□□□□ 0.74
RXRBP28702 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.7■□□□□ 0.74
RXRBP28702 AC011840.2-201ENST00000563063 1520 ntBASIC19.7■□□□□ 0.74
RXRBP28702 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC19.7■□□□□ 0.74
RXRBP28702 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRBP28702 AC060834.1-201ENST00000443027 2032 ntBASIC19.69■□□□□ 0.74
RXRBP28702 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RXRBP28702 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RXRBP28702 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.69■□□□□ 0.74
RXRBP28702 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.69■□□□□ 0.74
RXRBP28702 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.69■□□□□ 0.74
RXRBP28702 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 RNA5SP359-201ENST00000364838 113 ntBASIC19.69■□□□□ 0.74
RXRBP28702 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC19.69■□□□□ 0.74
RXRBP28702 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RXRBP28702 HLA-K-203ENST00000430151 1046 ntBASIC19.69■□□□□ 0.74
RXRBP28702 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms