Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CD40P25942 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.32□□□□□ -0.28
CD40P25942 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.32□□□□□ -0.28
CD40P25942 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.32□□□□□ -0.28
CD40P25942 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.32□□□□□ -0.28
CD40P25942 C2orf27AP3-201ENST00000434123 579 ntBASIC13.32□□□□□ -0.28
CD40P25942 RPL7P3-201ENST00000441388 714 ntBASIC13.32□□□□□ -0.28
CD40P25942 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.32□□□□□ -0.28
CD40P25942 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.32□□□□□ -0.28
CD40P25942 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.32□□□□□ -0.28
CD40P25942 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.32□□□□□ -0.28
CD40P25942 AL354718.3-201ENST00000616414 581 ntBASIC13.32□□□□□ -0.28
CD40P25942 CR382287.1-201ENST00000623954 586 ntBASIC13.32□□□□□ -0.28
CD40P25942 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.32□□□□□ -0.28
CD40P25942 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 AL139384.1-201ENST00000612143 3047 ntBASIC13.32□□□□□ -0.28
CD40P25942 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CD40P25942 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.32□□□□□ -0.28
CD40P25942 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40P25942 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40P25942 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CD40P25942 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.31□□□□□ -0.28
CD40P25942 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
CD40P25942 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 TNRC18P3-201ENST00000441896 2691 ntBASIC13.31□□□□□ -0.28
CD40P25942 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40P25942 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40P25942 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.31□□□□□ -0.28
CD40P25942 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.31□□□□□ -0.28
CD40P25942 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CD40P25942 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40P25942 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.31□□□□□ -0.28
CD40P25942 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.31□□□□□ -0.28
CD40P25942 AC114812.1-204ENST00000449669 728 ntBASIC13.31□□□□□ -0.28
CD40P25942 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40P25942 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CD40P25942 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.31□□□□□ -0.28
CD40P25942 AL645728.2-202ENST00000641679 227 ntBASIC13.31□□□□□ -0.28
CD40P25942 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CD40P25942 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40P25942 AC105250.1-201ENST00000509378 2057 ntBASIC13.31□□□□□ -0.28
CD40P25942 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40P25942 KRT8P35-201ENST00000483942 1338 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms