Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 MIR4259-201ENST00000584466 101 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.09□□□□□ -0.31
COL8A2P25067 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.09□□□□□ -0.31
COL8A2P25067 AC093813.1-201ENST00000605066 256 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 AC107373.2-201ENST00000607735 490 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 MIR6805-201ENST00000615055 62 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 AC005252.2-201ENST00000624630 1141 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
COL8A2P25067 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.31
COL8A2P25067 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.08□□□□□ -0.31
COL8A2P25067 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
COL8A2P25067 AC092127.1-201ENST00000567093 3455 ntBASIC13.08□□□□□ -0.31
COL8A2P25067 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
COL8A2P25067 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.08□□□□□ -0.31
COL8A2P25067 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
COL8A2P25067 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
COL8A2P25067 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 MSTO2P-201ENST00000314835 1709 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
COL8A2P25067 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 BAATP1-201ENST00000412284 1225 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.08□□□□□ -0.32
COL8A2P25067 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.08□□□□□ -0.32
COL8A2P25067 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 AP001889.1-201ENST00000525414 633 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 AP001582.1-201ENST00000525856 295 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
COL8A2P25067 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 SNX29P1-201ENST00000548357 1007 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.08□□□□□ -0.32
COL8A2P25067 AP001063.1-201ENST00000568332 529 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 AL022328.1-201ENST00000610050 478 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.08□□□□□ -0.32
COL8A2P25067 MIR6752-201ENST00000618442 71 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 AC134312.5-201ENST00000568031 1313 ntBASIC13.08□□□□□ -0.32
COL8A2P25067 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
COL8A2P25067 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
COL8A2P25067 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COL8A2P25067 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms