Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.96■□□□□ 0.46
ERCC3P19447 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC3P19447 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ERCC3P19447 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
ERCC3P19447 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ERCC3P19447 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 YBX1P6-201ENST00000442962 1002 ntBASIC17.95■□□□□ 0.46
ERCC3P19447 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 AC022137.2-201ENST00000503482 481 ntBASIC17.95■□□□□ 0.46
ERCC3P19447 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.95■□□□□ 0.46
ERCC3P19447 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ERCC3P19447 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC3P19447 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC3P19447 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ERCC3P19447 AC020907.1-201ENST00000616460 1350 ntBASIC17.94■□□□□ 0.46
ERCC3P19447 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 ACKR1-201ENST00000368121 1240 ntBASIC17.94■□□□□ 0.46
ERCC3P19447 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC3P19447 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC3P19447 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC3P19447 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC3P19447 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ERCC3P19447 AC079316.1-201ENST00000548397 411 ntBASIC17.94■□□□□ 0.46
ERCC3P19447 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC3P19447 AC010328.2-201ENST00000597698 1111 ntBASIC17.94■□□□□ 0.46
ERCC3P19447 AC093813.1-201ENST00000605066 256 ntBASIC17.94■□□□□ 0.46
ERCC3P19447 AC107373.2-201ENST00000607735 490 ntBASIC17.94■□□□□ 0.46
ERCC3P19447 RHOXF1P1-202ENST00000635473 501 ntBASIC17.94■□□□□ 0.46
ERCC3P19447 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC3P19447 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC3P19447 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC3P19447 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
ERCC3P19447 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
ERCC3P19447 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC3P19447 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
ERCC3P19447 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC3P19447 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC3P19447 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC3P19447 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC3P19447 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC3P19447 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.93■□□□□ 0.46
ERCC3P19447 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC3P19447 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
ERCC3P19447 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC3P19447 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC3P19447 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC3P19447 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 AC009542.2-202ENST00000619004 1067 ntBASIC17.93■□□□□ 0.46
ERCC3P19447 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC3P19447 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms