Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 LINC02228-204ENST00000642115 2962 ntBASIC13.91□□□□□ -0.18
HLA-DOBP13765 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 AL133267.1-201ENST00000398220 340 ntBASIC13.91□□□□□ -0.18
HLA-DOBP13765 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 BASP1P1-201ENST00000430708 665 ntBASIC13.91□□□□□ -0.18
HLA-DOBP13765 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 AC092337.1-201ENST00000568699 1129 ntBASIC13.91□□□□□ -0.18
HLA-DOBP13765 AC027796.2-201ENST00000575326 344 ntBASIC13.91□□□□□ -0.18
HLA-DOBP13765 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 BTBD7P1-201ENST00000447253 1453 ntBASIC13.91□□□□□ -0.18
HLA-DOBP13765 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HLA-DOBP13765 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DOBP13765 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 RPL5P21-201ENST00000404620 815 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 KRT18P43-201ENST00000469825 1281 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 SRD5A3P1-201ENST00000603021 949 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 AC138969.3-201ENST00000546612 1459 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 AC138932.2-201ENST00000548268 1459 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 AC126755.4-201ENST00000549796 1459 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 AC006058.4-201ENST00000624016 1670 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 AGAP7P-201ENST00000582299 2062 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms