Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CCDC175P0C221 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC175P0C221 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC175P0C221 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC175P0C221 RNA5SP415-201ENST00000517246 115 ntBASIC16.78■□□□□ 0.28
CCDC175P0C221 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC175P0C221 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC175P0C221 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC175P0C221 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC175P0C221 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC175P0C221 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC175P0C221 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC175P0C221 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC175P0C221 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.78■□□□□ 0.28
CCDC175P0C221 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
CCDC175P0C221 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC175P0C221 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC175P0C221 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC175P0C221 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC175P0C221 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC175P0C221 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC175P0C221 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 AC142381.1-201ENST00000426099 345 ntBASIC16.77■□□□□ 0.28
CCDC175P0C221 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC175P0C221 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC175P0C221 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC175P0C221 AC026979.3-201ENST00000607315 403 ntBASIC16.77■□□□□ 0.28
CCDC175P0C221 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC175P0C221 AL773604.1-201ENST00000617417 272 ntBASIC16.77■□□□□ 0.28
CCDC175P0C221 AC116407.3-201ENST00000623905 1129 ntBASIC16.77■□□□□ 0.28
CCDC175P0C221 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC175P0C221 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC175P0C221 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 AC018529.2-202ENST00000611482 3087 ntBASIC16.77■□□□□ 0.27
CCDC175P0C221 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCDC175P0C221 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CCDC175P0C221 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC175P0C221 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CCDC175P0C221 AL928921.2-201ENST00000641325 2442 ntBASIC16.77■□□□□ 0.27
CCDC175P0C221 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC175P0C221 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC175P0C221 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC175P0C221 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC175P0C221 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC175P0C221 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC175P0C221 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC175P0C221 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CCDC175P0C221 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC175P0C221 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC175P0C221 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC175P0C221 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC175P0C221 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC175P0C221 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC175P0C221 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC175P0C221 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms