Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
MMP2P08253 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP2P08253 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP2P08253 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MMP2P08253 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 ACE3P-201ENST00000423435 1973 ntBASIC15.53■□□□□ 0.08
MMP2P08253 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP2P08253 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.52■□□□□ 0.08
MMP2P08253 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.52■□□□□ 0.08
MMP2P08253 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MMP2P08253 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.52■□□□□ 0.08
MMP2P08253 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP2P08253 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MMP2P08253 AL158070.2-201ENST00000623713 1621 ntBASIC15.52■□□□□ 0.08
MMP2P08253 AL157414.3-201ENST00000624276 1954 ntBASIC15.52■□□□□ 0.07
MMP2P08253 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
MMP2P08253 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
MMP2P08253 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.52■□□□□ 0.07
MMP2P08253 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP2P08253 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.52■□□□□ 0.07
MMP2P08253 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 AC103702.1-201ENST00000548801 2630 ntBASIC15.51■□□□□ 0.07
MMP2P08253 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 AL360270.3-201ENST00000609118 1348 ntBASIC15.51■□□□□ 0.07
MMP2P08253 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 HLA-K-203ENST00000430151 1046 ntBASIC15.51■□□□□ 0.07
MMP2P08253 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.51■□□□□ 0.07
MMP2P08253 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.51■□□□□ 0.07
MMP2P08253 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.51■□□□□ 0.07
MMP2P08253 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 AC133539.2-201ENST00000604757 467 ntBASIC15.51■□□□□ 0.07
MMP2P08253 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 RPSAP52-203ENST00000622976 1023 ntBASIC15.51■□□□□ 0.07
MMP2P08253 AC005252.2-201ENST00000624630 1141 ntBASIC15.51■□□□□ 0.07
MMP2P08253 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 PRSS30P-206ENST00000641773 873 ntBASIC15.51■□□□□ 0.07
MMP2P08253 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MMP2P08253 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP2P08253 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP2P08253 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms