Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 AL109954.1-202ENST00000564051 2148 ntBASIC13.57□□□□□ -0.24
SFTPBP07988 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SFTPBP07988 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.56□□□□□ -0.24
SFTPBP07988 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.56□□□□□ -0.24
SFTPBP07988 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SFTPBP07988 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
SFTPBP07988 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SFTPBP07988 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 AC004987.2-201ENST00000395959 1148 ntBASIC13.56□□□□□ -0.24
SFTPBP07988 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.56□□□□□ -0.24
SFTPBP07988 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.56□□□□□ -0.24
SFTPBP07988 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.56□□□□□ -0.24
SFTPBP07988 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.56□□□□□ -0.24
SFTPBP07988 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 AC093512.1-201ENST00000617969 520 ntBASIC13.56□□□□□ -0.24
SFTPBP07988 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SFTPBP07988 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.56□□□□□ -0.24
SFTPBP07988 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.56□□□□□ -0.24
SFTPBP07988 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.55□□□□□ -0.24
SFTPBP07988 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.55□□□□□ -0.24
SFTPBP07988 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 FAM86GP-201ENST00000448322 971 ntBASIC13.55□□□□□ -0.24
SFTPBP07988 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.55□□□□□ -0.24
SFTPBP07988 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
SFTPBP07988 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.55□□□□□ -0.24
SFTPBP07988 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.55□□□□□ -0.24
SFTPBP07988 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.55□□□□□ -0.24
SFTPBP07988 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SFTPBP07988 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.55□□□□□ -0.24
SFTPBP07988 MIR4313-201ENST00000580760 101 ntBASIC13.55□□□□□ -0.24
SFTPBP07988 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms