Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN1P07384 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 AP005018.1-201ENST00000525475 301 ntBASIC15.32■□□□□ 0.04
CAPN1P07384 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 AC005225.4-201ENST00000557330 545 ntBASIC15.32■□□□□ 0.04
CAPN1P07384 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN1P07384 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CAPN1P07384 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.32■□□□□ 0.04
CAPN1P07384 AC097359.3-201ENST00000603982 1210 ntBASIC15.32■□□□□ 0.04
CAPN1P07384 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN1P07384 AC004840.1-201ENST00000636359 365 ntBASIC15.32■□□□□ 0.04
CAPN1P07384 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CAPN1P07384 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN1P07384 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN1P07384 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN1P07384 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN1P07384 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CAPN1P07384 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
CAPN1P07384 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPN1P07384 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PIN1P1-201ENST00000412108 996 ntBASIC15.31■□□□□ 0.04
CAPN1P07384 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN1P07384 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPN1P07384 ZNF890P-202ENST00000530367 1156 ntBASIC15.31■□□□□ 0.04
CAPN1P07384 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPN1P07384 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CAPN1P07384 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.31■□□□□ 0.04
CAPN1P07384 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPN1P07384 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CAPN1P07384 AC012645.4-201ENST00000610691 1061 ntBASIC15.31■□□□□ 0.04
CAPN1P07384 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 SBF1P1-201ENST00000444527 5631 ntBASIC15.31■□□□□ 0.04
CAPN1P07384 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN1P07384 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN1P07384 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPN1P07384 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN1P07384 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN1P07384 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms