Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.91□□□□□ -0.34
CTSDP07339 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.91□□□□□ -0.34
CTSDP07339 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.91□□□□□ -0.34
CTSDP07339 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 RARRES2P8-201ENST00000566335 367 ntBASIC12.91□□□□□ -0.34
CTSDP07339 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.91□□□□□ -0.34
CTSDP07339 SLC25A6P4-201ENST00000586535 553 ntBASIC12.91□□□□□ -0.34
CTSDP07339 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.91□□□□□ -0.34
CTSDP07339 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.91□□□□□ -0.34
CTSDP07339 AC004877.2-201ENST00000623941 599 ntBASIC12.91□□□□□ -0.34
CTSDP07339 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 ST20-AS1-201ENST00000560255 4223 ntBASIC12.91□□□□□ -0.34
CTSDP07339 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 AP000845.1-201ENST00000581677 2131 ntBASIC12.91□□□□□ -0.34
CTSDP07339 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
CTSDP07339 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CTSDP07339 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.9□□□□□ -0.34
CTSDP07339 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.9□□□□□ -0.34
CTSDP07339 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.9□□□□□ -0.34
CTSDP07339 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 AC079776.4-201ENST00000511039 504 ntBASIC12.9□□□□□ -0.34
CTSDP07339 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.9□□□□□ -0.34
CTSDP07339 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.9□□□□□ -0.34
CTSDP07339 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 AL049840.3-201ENST00000602669 611 ntBASIC12.9□□□□□ -0.34
CTSDP07339 AC068137.2-201ENST00000605408 478 ntBASIC12.9□□□□□ -0.34
CTSDP07339 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.9□□□□□ -0.34
CTSDP07339 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms