Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 DPM3-202ENST00000368399 517 ntBASIC17.32■□□□□ 0.36
HMGCRP04035 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGCRP04035 ACTG1P2-201ENST00000415776 1125 ntBASIC17.32■□□□□ 0.36
HMGCRP04035 ACTG1P11-201ENST00000425411 1125 ntBASIC17.32■□□□□ 0.36
HMGCRP04035 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.32■□□□□ 0.36
HMGCRP04035 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 AL161670.2-201ENST00000557650 1227 ntBASIC17.32■□□□□ 0.36
HMGCRP04035 AC013355.1-201ENST00000562625 723 ntBASIC17.32■□□□□ 0.36
HMGCRP04035 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGCRP04035 AC018635.2-201ENST00000608625 364 ntBASIC17.32■□□□□ 0.36
HMGCRP04035 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCRP04035 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCRP04035 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCRP04035 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
HMGCRP04035 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGCRP04035 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 POM121L8P-201ENST00000417732 1281 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 POM121L9P-203ENST00000441984 1285 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 CHMP1AP1-201ENST00000445563 662 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCRP04035 AC100850.1-201ENST00000506768 649 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 AL391280.1-201ENST00000506969 1062 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCRP04035 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 AP003171.2-201ENST00000528208 925 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCRP04035 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCRP04035 MIR4313-201ENST00000580760 101 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCRP04035 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HMGCRP04035 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 CROCCP1-201ENST00000426910 5675 ntBASIC17.31■□□□□ 0.36
HMGCRP04035 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGCRP04035 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCRP04035 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCRP04035 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 AC018695.7-201ENST00000624587 2492 ntBASIC17.3■□□□□ 0.36
HMGCRP04035 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 AC069218.1-201ENST00000435269 762 ntBASIC17.3■□□□□ 0.36
HMGCRP04035 AC012618.1-201ENST00000461223 412 ntBASIC17.3■□□□□ 0.36
HMGCRP04035 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.3■□□□□ 0.36
HMGCRP04035 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.3■□□□□ 0.36
HMGCRP04035 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 AP003419.4-201ENST00000616071 517 ntBASIC17.3■□□□□ 0.36
HMGCRP04035 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.3■□□□□ 0.36
HMGCRP04035 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HMGCRP04035 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms