Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 FER1L4-210ENST00000615531 5998 ntBASIC17.12■□□□□ 0.33
LGR5O75473 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 DOC2GP-204ENST00000639052 2548 ntBASIC17.12■□□□□ 0.33
LGR5O75473 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.12■□□□□ 0.33
LGR5O75473 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
LGR5O75473 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LGR5O75473 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 CD8B2-202ENST00000417670 633 ntBASIC17.11■□□□□ 0.33
LGR5O75473 GPAA1P2-201ENST00000417923 928 ntBASIC17.11■□□□□ 0.33
LGR5O75473 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.11■□□□□ 0.33
LGR5O75473 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.11■□□□□ 0.33
LGR5O75473 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.11■□□□□ 0.33
LGR5O75473 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.11■□□□□ 0.33
LGR5O75473 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.11■□□□□ 0.33
LGR5O75473 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.11■□□□□ 0.33
LGR5O75473 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.11■□□□□ 0.33
LGR5O75473 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.11■□□□□ 0.33
LGR5O75473 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.11■□□□□ 0.33
LGR5O75473 AC138951.2-201ENST00000623455 1161 ntBASIC17.11■□□□□ 0.33
LGR5O75473 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.11■□□□□ 0.33
LGR5O75473 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LGR5O75473 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGR5O75473 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.11■□□□□ 0.33
LGR5O75473 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGR5O75473 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGR5O75473 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.1■□□□□ 0.33
LGR5O75473 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.1■□□□□ 0.33
LGR5O75473 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.1■□□□□ 0.33
LGR5O75473 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.1■□□□□ 0.33
LGR5O75473 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.1■□□□□ 0.33
LGR5O75473 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGR5O75473 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.1■□□□□ 0.33
LGR5O75473 AC023310.1-201ENST00000554836 735 ntBASIC17.1■□□□□ 0.33
LGR5O75473 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGR5O75473 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.1■□□□□ 0.33
LGR5O75473 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.1■□□□□ 0.33
LGR5O75473 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 AL139099.5-201ENST00000635274 300 ntBASIC17.1■□□□□ 0.33
LGR5O75473 AC006453.4-201ENST00000636949 1252 ntBASIC17.1■□□□□ 0.33
LGR5O75473 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGR5O75473 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.1■□□□□ 0.33
LGR5O75473 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LGR5O75473 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGR5O75473 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms