Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.98■□□□□ 0.47
CTNND1O60716 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CTNND1O60716 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTNND1O60716 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNND1O60716 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CTNND1O60716 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CTNND1O60716 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.97■□□□□ 0.47
CTNND1O60716 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.97■□□□□ 0.47
CTNND1O60716 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.97■□□□□ 0.47
CTNND1O60716 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.97■□□□□ 0.47
CTNND1O60716 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.97■□□□□ 0.47
CTNND1O60716 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNND1O60716 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.97■□□□□ 0.47
CTNND1O60716 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 AC126915.1-201ENST00000522847 1038 ntBASIC17.97■□□□□ 0.47
CTNND1O60716 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNND1O60716 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.97■□□□□ 0.47
CTNND1O60716 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.97■□□□□ 0.47
CTNND1O60716 AL603764.1-201ENST00000636452 321 ntBASIC17.97■□□□□ 0.47
CTNND1O60716 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.97■□□□□ 0.47
CTNND1O60716 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNND1O60716 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CTNND1O60716 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.97■□□□□ 0.47
CTNND1O60716 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.97■□□□□ 0.47
CTNND1O60716 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.97■□□□□ 0.47
CTNND1O60716 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNND1O60716 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
CTNND1O60716 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTNND1O60716 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.96■□□□□ 0.47
CTNND1O60716 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.96■□□□□ 0.47
CTNND1O60716 POM121L8P-201ENST00000417732 1281 ntBASIC17.96■□□□□ 0.47
CTNND1O60716 POM121L9P-203ENST00000441984 1285 ntBASIC17.96■□□□□ 0.47
CTNND1O60716 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.96■□□□□ 0.47
CTNND1O60716 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.96■□□□□ 0.47
CTNND1O60716 AC022616.1-201ENST00000518688 554 ntBASIC17.96■□□□□ 0.47
CTNND1O60716 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNND1O60716 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.96■□□□□ 0.47
CTNND1O60716 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNND1O60716 SAMD11P1-201ENST00000571429 661 ntBASIC17.96■□□□□ 0.47
CTNND1O60716 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.96■□□□□ 0.47
CTNND1O60716 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.96■□□□□ 0.47
CTNND1O60716 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.96■□□□□ 0.47
CTNND1O60716 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTNND1O60716 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTNND1O60716 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.96■□□□□ 0.47
CTNND1O60716 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CTNND1O60716 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
CTNND1O60716 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 AL596257.1-201ENST00000641463 2694 ntBASIC17.95■□□□□ 0.46
CTNND1O60716 AC127383.1-201ENST00000444697 1800 ntBASIC17.95■□□□□ 0.46
CTNND1O60716 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.95■□□□□ 0.46
CTNND1O60716 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.95■□□□□ 0.46
CTNND1O60716 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CTNND1O60716 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms