Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LCMT2O60294 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LCMT2O60294 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.81□□□□□ -0.04
LCMT2O60294 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 AC026410.3-201ENST00000514280 936 ntBASIC14.81□□□□□ -0.04
LCMT2O60294 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.81□□□□□ -0.04
LCMT2O60294 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
LCMT2O60294 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.81□□□□□ -0.04
LCMT2O60294 AC140912.1-201ENST00000577171 1054 ntBASIC14.81□□□□□ -0.04
LCMT2O60294 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.81□□□□□ -0.04
LCMT2O60294 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.81□□□□□ -0.04
LCMT2O60294 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCMT2O60294 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.81□□□□□ -0.04
LCMT2O60294 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LCMT2O60294 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
LCMT2O60294 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LCMT2O60294 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
LCMT2O60294 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.8□□□□□ -0.04
LCMT2O60294 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.8□□□□□ -0.04
LCMT2O60294 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.8□□□□□ -0.04
LCMT2O60294 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.8□□□□□ -0.04
LCMT2O60294 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.8□□□□□ -0.04
LCMT2O60294 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LCMT2O60294 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.8□□□□□ -0.04
LCMT2O60294 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LCMT2O60294 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.8□□□□□ -0.04
LCMT2O60294 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.8□□□□□ -0.04
LCMT2O60294 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.8□□□□□ -0.04
LCMT2O60294 FLJ16779-201ENST00000612722 7638 ntBASIC14.8□□□□□ -0.04
LCMT2O60294 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LCMT2O60294 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LCMT2O60294 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.79□□□□□ -0.04
LCMT2O60294 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 AP002414.2-201ENST00000591780 3365 ntBASIC14.79□□□□□ -0.04
LCMT2O60294 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LCMT2O60294 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.79□□□□□ -0.04
LCMT2O60294 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.79□□□□□ -0.04
LCMT2O60294 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms