Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 AC104640.1-201ENST00000562617 2109 ntBASIC11.16□□□□□ -0.62
PAX4O43316 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.16□□□□□ -0.62
PAX4O43316 AL158211.3-201ENST00000607385 239 ntBASIC11.16□□□□□ -0.62
PAX4O43316 AL138828.2-201ENST00000615812 383 ntBASIC11.16□□□□□ -0.62
PAX4O43316 SPDYE12P-201ENST00000618416 771 ntBASIC11.16□□□□□ -0.62
PAX4O43316 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
PAX4O43316 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
PAX4O43316 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
PAX4O43316 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
PAX4O43316 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.16□□□□□ -0.62
PAX4O43316 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PAX4O43316 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.16□□□□□ -0.62
PAX4O43316 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
PAX4O43316 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.15□□□□□ -0.62
PAX4O43316 RPL37AP1-201ENST00000412502 279 ntBASIC11.15□□□□□ -0.62
PAX4O43316 TREML5P-201ENST00000421694 576 ntBASIC11.15□□□□□ -0.62
PAX4O43316 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.15□□□□□ -0.62
PAX4O43316 PMS2P2-201ENST00000425039 1128 ntBASIC11.15□□□□□ -0.62
PAX4O43316 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC11.15□□□□□ -0.62
PAX4O43316 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.15□□□□□ -0.62
PAX4O43316 AL512638.1-201ENST00000457493 794 ntBASIC11.15□□□□□ -0.62
PAX4O43316 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.15□□□□□ -0.62
PAX4O43316 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.15□□□□□ -0.62
PAX4O43316 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.15□□□□□ -0.62
PAX4O43316 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 AL033527.5-202ENST00000641632 1098 ntBASIC11.15□□□□□ -0.62
PAX4O43316 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
PAX4O43316 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PAX4O43316 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
PAX4O43316 AL136379.1-201ENST00000623471 2642 ntBASIC11.15□□□□□ -0.62
PAX4O43316 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
PAX4O43316 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PAX4O43316 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PAX4O43316 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
PAX4O43316 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
PAX4O43316 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
PAX4O43316 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PAX4O43316 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
PAX4O43316 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.14□□□□□ -0.63
PAX4O43316 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.14□□□□□ -0.63
PAX4O43316 AC092384.3-202ENST00000564646 2873 ntBASIC11.14□□□□□ -0.63
PAX4O43316 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.14□□□□□ -0.63
PAX4O43316 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.14□□□□□ -0.63
PAX4O43316 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PAX4O43316 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PAX4O43316 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PAX4O43316 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.14□□□□□ -0.63
PAX4O43316 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PAX4O43316 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
PAX4O43316 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
PAX4O43316 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PAX4O43316 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.14□□□□□ -0.63
PAX4O43316 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.14□□□□□ -0.63
PAX4O43316 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PAX4O43316 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PAX4O43316 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms